aopy
Contents:
Getting Started:
Contributing:
Analysis:
Data:
Postproc:
Precondition:
Preproc:
Torch:
Visualization:
Utils:
Examples:
Database Example
Eyetracking validation
Screen Latency Demo
Setting memory limits
Saving kinematics and neural data segments
Data transforms example
Neuropixel data loading and quality metrics
Reach onset and saccade onset example
Basic analyses in ECoG or LFP signals
Extract spectral power features
Tabulate tracking task data & kinematics
aopy
Examples:
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Examples:
Database Example
Finding a single recording
Finding a range of dates
Select from a dropdown menu
Select anything
Loading the data
Setting filter function to a defined function
Querying a different rig
Eyetracking validation
Calibrating eye data
Plotting calibrated data
Screen Latency Demo
Setup
Load data and calculate latency for each block
Setting memory limits
Available memory unused by anyone
Undoing the default memory limit
Using memory limits
Seeing total memory
Saving kinematics and neural data segments
Define what to save
Save data
Load data
Data transforms example
Setup & Data
Getting kinematic data in world coordinates
Getting and using experimental transformations
Neuropixel data loading and quality metrics
Load preprocessed neuropixel data
Tabulate neuropixel data
Apply unit quality metrics
Apply all unit quality metrics
Reach onset and saccade onset example
Load data
Reach onset
Saccade onset
Basic analyses in ECoG or LFP signals
Get a relevant task id
Load relevant data
Preprocessing
Calculate spectral power using multitaper method
Visualization
Visualize temporal changes in spectral power at exmaple channels
Visualize a spatial map about the difference in delta power
Decoding analysis
Visualize results
Extract spectral power features
Tabulate behavior trials
Load neural data
Load features using an existing decoder
Load arbitrary features from timeseries data
Tabulate tracking task data & kinematics
Tabulate (newer) experiment data
Tabulate (older) experiment data
Filter tabulated data
Get reward trial kinematics using tabulated data
Get penalty trial kinematics using tabulated data
Get inter-trial kinematics using tabulated data